STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctf18Chromosome transmission fidelity protein 18. (971 aa)    
Predicted Functional Partners:
CTRI78_v006099
Uncharacterized protein.
   
 0.999
CTF8
Chromosome transmission fidelity protein 8.
   
 0.992
RFC3
Replication factor C subunit 3.
   
0.986
CTRI78_v000587
Replication factor C subunit 5.
   
 0.986
RFC2
Replication factor C subunit 2.
   
 0.984
pol2
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.983
rfc4
Replication factor C subunit 4.
   
0.983
pol3
DNA polymerase.
   
 0.977
pol1
DNA polymerase.
   
 0.975
CTRI78_v009899
Putative RNA-binding protein.
   
 0.969
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.