STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v007176Acyl-CoA dehydrogenase family member 11. (434 aa)    
Predicted Functional Partners:
CTRI78_v000988
Acyl-CoA dehydrogenase family member 11.
 
     0.951
CTRI78_v012215
Uncharacterized protein.
 
      0.887
ubx1
UBX domain-containing protein 1.
    
   0.883
CTRI78_v006222
Glutaryl-CoA dehydrogenase.
 
 
 0.789
CTRI78_v010017
Short/branched chain specific acyl-CoA dehydrogenase.
 
 
 0.775
erg10
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.766
CTRI78_v008427
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.766
CTRI78_v004821
Isovaleryl-CoA dehydrogenase.
 
 
  0.763
CTRI78_v002250
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.740
CTRI78_v004299
Enoyl-CoA hydratase.
   
 0.740
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.