STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTC3Vacuolar transporter chaperone 3. (783 aa)    
Predicted Functional Partners:
nuc-2
Ankyrin repeat protein nuc-2.
   
 0.834
pho-5-1
Repressible high-affinity phosphate permease.
   
 
 0.758
pho-5-0
Repressible high-affinity phosphate permease.
   
 
 0.758
NIC96
Nucleoporin NIC96.
 
      0.743
GDE1
Glycerophosphocholine phosphodiesterase GDE1.
   
 0.742
vtc4
Vacuolar transporter chaperone 4.
  
 
0.723
nrf1
Vacuolar transporter chaperone 1.
  
 
0.704
CTRI78_v003331
Putative sugar kinase.
 
  
   0.699
PHO85
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.691
mkcB
Putative serine/threonine-protein kinase mkcB.
    
 0.691
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.