STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aroM-2Pentafunctional AROM polypeptide 2. (758 aa)    
Predicted Functional Partners:
qa-3
Quinate dehydrogenase.
     
 0.971
CTRI78_v011003
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
     
0.946
CTRI78_v005256
Demethyl-4-deoxygadusol synthase.
 
   
  0.946
CTRI78_v003045
Putative transcriptional regulatory protein.
 
     0.936
trp-1
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 0.872
aro-2
Chorismate synthase.
  
 
 0.772
TRP2
Anthranilate synthase component 1.
  
 
 0.756
ARO7
Chorismate mutase.
  
 
 0.722
his-3
Histidine biosynthesis trifunctional protein.
  
  
 0.714
trp-3
Tryptophan synthase.
  
  
 0.713
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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