STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v001335Putative pyridoxal kinase. (358 aa)    
Predicted Functional Partners:
CTRI78_v007287
Putative pyridoxamine 5'-phosphate oxidase.
    
 0.973
PDX1-1
Pyridoxal 5'-phosphate synthase subunit PDX1; Belongs to the PdxS/SNZ family.
   
 0.961
CTRI78_v008736
Pyridox_oxase_2 domain-containing protein.
     
 0.957
PDX2
Putative pyridoxal 5'-phosphate synthase subunit PDX2.
    
 0.865
pcn1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
 
 
    0.862
scon-3
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
    
 
 0.839
CTRI78_v002471
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.824
pho2
4-nitrophenylphosphatase.
    
 0.823
CTRI78_v004206
Uncharacterized protein.
    
 
 0.779
CTRI78_v010947
Adrenodoxin-like protein.
     
 0.766
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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