STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psoBAlpha/beta hydrolase psoB. (481 aa)    
Predicted Functional Partners:
eso1
N-acetyltransferase eso1.
   
 0.978
rev7
DNA polymerase zeta processivity subunit.
   
 0.958
rev3
DNA polymerase.
   
 0.957
POLK
DNA polymerase kappa.
   
 0.940
POLI
DNA polymerase iota.
   
 0.933
pcn1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.895
CTRI78_v001333
Vezatin domain-containing protein.
    
 0.895
crp-79
Ubiquitin-60S ribosomal protein L40.
    
  0.872
CTRI78_v011354
Ubiquitin-like domain-containing protein.
    
  0.803
CTRI78_v000520
Ubiquitin-like domain-containing protein.
    
  0.803
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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