STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOX1Alpha-dioxygenase 1. (686 aa)    
Predicted Functional Partners:
CTRI78_v005884
Aspartate aminotransferase.
    
 0.726
CTRI78_v009688
Aspartate aminotransferase.
    
 0.700
pteN
annotation not available
    
 0.574
NAT1
Arylamine N-acetyltransferase 1; Belongs to the arylamine N-acetyltransferase family.
    
  0.536
aaed1
Thioredoxin-like protein AAED1.
     
 0.523
plh1
Phospholipid:diacylglycerol acyltransferase.
     
 0.520
wos2
Protein wos2.
     
 0.515
CTRI78_v000671
Aspartate aminotransferase.
    
 0.471
CTRI78_v009960
Uncharacterized protein.
     
 0.431
CTRI78_v003546
Uncharacterized protein.
     
 0.431
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.