STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v001811Sphingosine N-acyltransferase-like protein FUM17. (448 aa)    
Predicted Functional Partners:
CTRI78_v002979
Dihydrosphingosine 1-phosphate phosphatase.
    
 0.967
sur2
Sphingolipid C4-hydroxylase sur2; Belongs to the sterol desaturase family.
   
 0.965
dsd1
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
    
 0.961
gsl-3
3-ketodihydrosphingosine reductase gsl-3.
     
 0.879
NCER3
Neutral ceramidase.
     
 0.847
NCER2
Neutral ceramidase.
     
 0.847
YDC1
Alkaline ceramidase YDC1.
    
 0.844
Acer3
Alkaline ceramidase 3.
    
 0.825
LCB4
Sphingoid long chain base kinase 4.
     
 0.796
CTRI78_v004624
Sphingosine N-acyltransferase-like protein FUM17.
  
  
 
0.747
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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