STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS12666.1Nitrogen fixation protein NifU. (162 aa)    
Predicted Functional Partners:
SDS12630.1
Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.998
SDS12602.1
Fe-S cluster assembly ATP-binding protein.
 
  
 0.997
SDS12702.1
Metal-sulfur cluster biosynthetic enzyme.
 
    0.997
SDS12522.1
Iron-regulated ABC transporter permease protein SufD.
 
  
 0.994
SDS03903.1
Cysteine desulfurase.
  
 0.990
SDS77038.1
Cysteine desulfurase.
  
 0.990
SDT34885.1
Cysteine desulfurase.
  
 0.990
SDS96899.1
Selenocysteine lyase/Cysteine desulfurase.
 
 0.987
SDS32224.1
Cysteine desulfurase family protein, VC1184 subfamily.
 
 0.981
SDR74575.1
isopenicillin-N epimerase.
  
 0.958
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
Server load: low (26%) [HD]