STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT24869.1Immune inhibitor A. (839 aa)    
Predicted Functional Partners:
SDS61204.1
Hypothetical protein.
  
     0.560
SDS63630.1
Helix-turn-helix domain-containing protein.
  
     0.514
SDT23617.1
Protein N-acetyltransferase, RimJ/RimL family.
  
    0.466
SDT14195.1
Hypothetical protein.
  
     0.439
SDS63722.1
Major Facilitator Superfamily protein.
  
     0.415
SDT24792.1
Cellulose synthase (UDP-forming).
       0.402
SDT24816.1
Barrel-sandwich domain of CusB or HlyD membrane-fusion.
       0.402
SDT24848.1
Endoglucanase Acf2.
       0.402
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.