STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF77453.1Redoxin family protein; KEGG: reh:H16_A0306 3.2e-09 bcp; peroxiredoxin K00435. (184 aa)    
Predicted Functional Partners:
EEF77454.1
Putative N-acetylmuramoyl-L-alanine amidase; KEGG: bfs:BF3352 7.9e-84 putative cell wall biosynthesis related protein K01448.
       0.823
EEF77016.1
Antioxidant, AhpC/TSA family; KEGG: mbo:Mb3945 7.4e-07 trxC; thioredoxin TrxC (TRX) (MPT46) K03671.
 
   
 0.729
EEF74912.1
Antioxidant, AhpC/TSA family; KEGG: reh:H16_A0306 3.6e-08 bcp; peroxiredoxin K00435.
 
   
 0.723
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.554
EEF77451.1
Biotin-requiring enzyme; KEGG: cel:F27D9.5 2.1e-12 F27D9.5 K01965.
       0.544
EEF77452.1
Carboxyl transferase domain protein; KEGG: bfr:BF3531 4.8e-219 propionyl-CoA carboxylase beta chain K01966; Psort location: Cytoplasmic, score: 8.96.
       0.544
accC
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.502
EEF77163.1
Redoxin family protein; KEGG: rru:Rru_A3433 5.0e-06 thioredoxin K01829.
 
   
 0.417
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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