STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmag_2918PFAM: Aldehyde Dehydrogenase; KEGG: hsl:OE4529F aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (497 aa)    
Predicted Functional Partners:
Nmag_0810
Pyridoxal phosphate-dependent aminotransferase; PFAM: aminotransferase class-III; KEGG: hma:rrnAC0382 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.936
Nmag_2523
PFAM: aminotransferase class-III; KEGG: rsa:RSal33209_1802 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.936
panD
Aspartate 1-decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily.
   
 0.925
adh1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: hma:rrnAC1975 alcohol dehydrogenase.
 
 
 0.923
acdA
acetate--CoA ligase (ADP-forming); KEGG: hmu:Hmuk_2291 acetyl coenzyme A synthetase (ADP forming), alpha domain protein; PFAM: CoA-binding domain protein; ATP-grasp domain protein; SMART: CoA-binding domain protein.
    
 0.914
acyP
PFAM: acylphosphatase; KEGG: nph:NP3750A acylphosphatase.
    
 0.912
Nmag_0806
KEGG: hla:Hlac_0380 MOFRL domain protein; PFAM: MOFRL domain protein.
   
 
 0.911
Nmag_2893
PFAM: amine oxidase; KEGG: rop:ROP_04530 flavin-containing amine oxidase.
 
 
 
 0.906
Nmag_0742
PQQ repeat protein; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; KEGG: acr:Acry_1570 pyrrolo-quinoline quinone.
     
  0.900
Nmag_1075
4-phosphopantoate--beta-alanine ligase; PFAM: Protein of unknown function DUF137; KEGG: hut:Huta_2721 pantothenate synthetase.
     
  0.900
Your Current Organism:
Natrialba magadii
NCBI taxonomy Id: 547559
Other names: N. magadii ATCC 43099, Natrialba magadii ATCC 43099, Natrialba magadii DSM 3394, Natrialba magadii MS3, Natrialba magadii NCIMB 2190, Natrialba magadii str. ATCC 43099, Natrialba magadii strain ATCC 43099
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