STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBD2Rhomboid protein 2; Probable serine protease; Belongs to the peptidase S54 family. (266 aa)    
Predicted Functional Partners:
CDC48
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 
 0.946
Q6FKH6_CANGA
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
  
 0.636
Q6FSU3_CANGA
Rhomboid domain-containing protein.
   
  
 0.631
Q6FWV5_CANGA
Uncharacterized protein.
    
 
 0.533
Q6FRJ3_CANGA
BHLH domain-containing protein.
   
 
 0.489
Q6FMF4_CANGA
Uncharacterized protein.
   
  
 0.476
Q6FQP1_CANGA
ATP synthase subunit gamma.
   
  
 0.476
Q6FLX7_CANGA
Uncharacterized protein.
   
 
 0.461
KEX2
P/Homo B domain-containing protein.
      
 0.447
Q6FL07_CANGA
UBX domain-containing protein.
    
 
 0.443
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, [. glabrata CBS 138, [Candida] glabrata CBS 138
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.