STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6FRI2_CANGAbVLRF1 domain-containing protein. (650 aa)    
Predicted Functional Partners:
CDC48
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.915
Q6FWV5_CANGA
Uncharacterized protein.
   
 
 0.836
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
   0.755
NPL4
Nuclear protein localization protein 4; Involved in the import of nuclear-targeted proteins into the nucleus and the export of poly(A) RNA out of the nucleus. Has a role in the endoplasmic reticulum-associated degradation (ERAD) pathway (By similarity); Belongs to the NPL4 family.
    
 0.694
Q6FKT5_CANGA
Uncharacterized protein.
   
 
 0.688
Q6FK46_CANGA
Uncharacterized protein.
   
 
 0.635
Q6FNT9_CANGA
U-box domain-containing protein.
   
 
 0.618
UFD1
Uncharacterized protein.
      
 0.592
Q6FNF8_CANGA
Uncharacterized protein.
    
 
 0.581
Q6FS84_CANGA
RING-type domain-containing protein.
   
 
 0.520
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, [. glabrata CBS 138, [Candida] glabrata CBS 138
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