STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML34797.1Putative type VI secretion system protein VgrGA. (738 aa)    
Predicted Functional Partners:
AML35287.1
Putative 24.6 kDa protein in ccpA 3'region.
 
  
 0.935
AML34979.1
Hypothetical protein.
 
  
 0.925
AML35289.1
Hypothetical protein.
 
  
 0.925
AML38570.1
Protein hcp1.
 
  
 0.925
AML34790.1
Hypothetical protein.
 
  
 0.917
AML34980.1
Hypothetical protein.
 
  
 0.874
AML34789.1
Hypothetical protein.
 
  
 0.850
AML34982.1
Chaperone protein ClpB.
 
  
 0.848
AML35290.1
Protein ClpV1.
 
  
 0.847
AML34771.1
Hypothetical protein.
  
 0.823
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.