STRINGSTRING
yhdY protein (Pantoea agglomerans) - STRING interaction network
"yhdY" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhdYannotation not available (219 aa)    
Predicted Functional Partners:
BW31_00021
annotation not available (261 aa)
        0.981
BW31_00024
annotation not available (243 aa)
 
  0.979
BW31_00022
annotation not available (222 aa)
 
       
0.914
BW31_00026
annotation not available (417 aa)
 
          0.821
pucG
annotation not available (411 aa)
 
          0.814
BW31_00028
annotation not available (111 aa)
              0.788
BW31_00027
annotation not available (164 aa)
              0.783
BW31_00478
annotation not available (243 aa)
        0.724
BW31_00020
annotation not available (279 aa)
          0.719
artI
annotation not available (243 aa)
        0.718
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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