STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
proCCatalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (270 aa)    
Predicted Functional Partners:
proA
Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.
 
 
 0.900
proB
Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
 
 
 0.883
putA
Belongs to the aldehyde dehydrogenase family.
   
 
 0.869
guaA
annotation not available
  
  
 0.841
gltA_2
annotation not available
 
   
 0.816
purL
annotation not available
     
 0.800
rnhA
Endonuclease that specifically degrades the RNA of RNA-DNA hybrids
      0.781
ffh
annotation not available
      
 0.658
pfkA
annotation not available
 
    0.649
yggS
Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family
  
 0.631
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea herbicola, Pseudomonas herbicola
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