STRINGSTRING
BW31_00171 protein (Pantoea agglomerans) - STRING interaction network
"BW31_00171" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW31_00171annotation not available (1051 aa)    
Predicted Functional Partners:
BW31_00172
annotation not available (397 aa)
  0.997
tolC_2
annotation not available (488 aa)
  0.897
BW31_01875
annotation not available (440 aa)
   
  0.867
BW31_04038
annotation not available (384 aa)
 
  0.809
BW31_01801
annotation not available (1034 aa)
   
   
 
0.806
BW31_03349
annotation not available (403 aa)
 
  0.759
mdtA
annotation not available (412 aa)
 
  0.738
BW31_02089
annotation not available (461 aa)
 
  0.710
BW31_03346
annotation not available (461 aa)
 
  0.688
BW31_00448
annotation not available (509 aa)
 
  0.687
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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