STRINGSTRING
BW31_00400 protein (Pantoea agglomerans) - STRING interaction network
"BW31_00400" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW31_00400annotation not available (765 aa)    
Predicted Functional Partners:
BW31_01827
annotation not available (471 aa)
         
  0.914
BW31_04269
annotation not available (787 aa)
   
 
  0.913
BW31_04355
annotation not available (479 aa)
 
 
  0.910
BW31_02653
annotation not available (476 aa)
 
 
  0.910
BW31_02566
annotation not available (464 aa)
 
 
  0.910
BW31_00401
annotation not available (291 aa)
 
        0.681
fadI
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed (436 aa)
           
  0.647
BW31_04020
annotation not available (338 aa)
           
  0.641
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed (387 aa)
           
  0.599
dld
Quinone-dependent D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate; Belongs to the quinone-dependent D-lactate dehydrogenase family (567 aa)
              0.586
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
Server load: low (16%) [HD]