STRINGSTRING
BW31_00538 protein (Pantoea agglomerans) - STRING interaction network
"BW31_00538" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW31_00538annotation not available (326 aa)    
Predicted Functional Partners:
BW31_00539
annotation not available (433 aa)
 
     
  0.825
BW31_04796
annotation not available (344 aa)
 
 
  0.646
BW31_04792
annotation not available (725 aa)
 
     
  0.622
BW31_04327
annotation not available (389 aa)
 
  0.572
BW31_00815
annotation not available (389 aa)
 
  0.572
BW31_04812
annotation not available (272 aa)
   
  0.558
BW31_03465
annotation not available (443 aa)
   
          0.529
amsC
annotation not available (378 aa)
   
          0.524
BW31_03977
annotation not available (337 aa)
 
  0.514
BW31_03940
annotation not available (393 aa)
 
 
  0.510
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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