STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rihB_1Belongs to the IUNH family. (306 aa)    
Predicted Functional Partners:
guaD
Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia
 
 
 0.929
ushA
Belongs to the 5'-nucleotidase family.
 
  0.923
add
annotation not available
  
 
 0.923
hpt
Belongs to the purine/pyrimidine phosphoribosyltransferase family
  
 
 0.919
apt
Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
    
 0.918
hcrC
annotation not available
 
  
  0.917
cpdB_1
Belongs to the 5'-nucleotidase family.
 
  0.911
cutS
annotation not available
   
 
  0.908
gpt
Acts on guanine, xanthine and to a lesser extent hypoxanthine
    
 0.906
gsk
annotation not available
  
 
 0.906
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea herbicola, Pseudomonas herbicola
Server load: low (1%) [HD]