STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW31_01233annotation not available (511 aa)    
Predicted Functional Partners:
BW31_01235
annotation not available
  
 0.995
bcsB_1
Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP)
 
  
 0.913
bcsA
annotation not available
 
  
 0.905
bcsC_4
annotation not available
 
   
 0.903
BW31_01231
annotation not available
 
     0.898
BW31_01234
annotation not available
       0.853
bcsA_5
annotation not available
 
  
 0.577
BW31_01232
annotation not available
       0.526
BW31_01395
annotation not available
  
     0.508
BW31_02117
annotation not available
  
     0.495
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea herbicola, Pseudomonas herbicola
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