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fdhE protein (Pantoea agglomerans) - STRING interaction network
"fdhE" - Protein FdhE homolog in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhEProtein FdhE homolog; Necessary for formate dehydrogenase activity (307 aa)    
Predicted Functional Partners:
BW31_01265
annotation not available (1025 aa)
 
 
  0.998
BW31_01267
annotation not available (213 aa)
 
  0.992
BW31_01266
annotation not available (299 aa)
 
 
  0.985
BW31_01269
annotation not available (203 aa)
              0.778
fdhD
Sulfur carrier protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH (274 aa)
 
 
 
  0.737
BW31_00359
annotation not available (260 aa)
 
     
  0.675
BW31_02520
annotation not available (990 aa)
   
 
  0.616
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1315 aa)
           
  0.487
BW31_04871
annotation not available (761 aa)
     
 
  0.460
BW31_03822
annotation not available (767 aa)
     
 
  0.460
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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