STRINGSTRING
BW31_01611 protein (Pantoea agglomerans) - STRING interaction network
"BW31_01611" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW31_01611annotation not available (105 aa)    
Predicted Functional Partners:
yccJ
annotation not available (76 aa)
   
          0.713
csiE
annotation not available (422 aa)
   
          0.672
BW31_01253
annotation not available (98 aa)
   
          0.638
BW31_03827
annotation not available (370 aa)
   
          0.634
BW31_04978
annotation not available (59 aa)
   
          0.619
BW31_01610
annotation not available (297 aa)
              0.618
rcsA
Transcriptional regulatory protein RcsA; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds to DNA to regulate expression of genes (211 aa)
   
          0.610
BW31_00087
annotation not available (63 aa)
   
          0.603
BW31_01027
annotation not available (97 aa)
   
          0.598
BW31_01124
annotation not available (80 aa)
   
          0.594
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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