STRINGSTRING
BW31_02054 protein (Pantoea agglomerans) - STRING interaction network
"BW31_02054" - annotation not available in Pantoea agglomerans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW31_02054annotation not available (81 aa)    
Predicted Functional Partners:
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate (347 aa)
       
  0.825
BW31_01702
annotation not available (104 aa)
   
          0.712
BW31_01050
annotation not available (184 aa)
   
          0.697
pgpC
annotation not available (238 aa)
   
          0.688
BW31_02569
annotation not available (114 aa)
   
   
  0.665
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (355 aa)
     
 
  0.639
BW31_00476
annotation not available (155 aa)
   
          0.638
BW31_04518
annotation not available (90 aa)
   
          0.637
BW31_00311
annotation not available (66 aa)
   
          0.637
BW31_00278
annotation not available (160 aa)
   
          0.626
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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