STRINGSTRING
lamB_1 protein (Pantoea agglomerans) - STRING interaction network
"lamB_1" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lamB_1annotation not available (420 aa)    
Predicted Functional Partners:
BW31_02826
annotation not available (406 aa)
 
 
  0.891
BW31_02306
annotation not available (406 aa)
 
 
  0.891
malE_2
annotation not available (396 aa)
 
 
  0.880
malE_1
annotation not available (396 aa)
 
 
  0.880
BW31_02955
annotation not available (312 aa)
 
   
  0.804
BW31_02435
annotation not available (312 aa)
 
   
  0.804
malF_2
annotation not available (507 aa)
 
   
  0.737
malF_1
annotation not available (507 aa)
 
   
  0.737
malG_2
annotation not available (296 aa)
 
 
  0.735
malG_1
annotation not available (296 aa)
 
 
  0.735
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
Server load: low (17%) [HD]