STRINGSTRING
yeeJ protein (Pantoea agglomerans) - STRING interaction network
"yeeJ" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeeJannotation not available (1374 aa)    
Predicted Functional Partners:
BW31_01726
annotation not available (2447 aa)
 
 
  0.854
BW31_02554
annotation not available (256 aa)
   
          0.723
BW31_04693
annotation not available (451 aa)
 
   
  0.704
BW31_02913
annotation not available (356 aa)
   
     
  0.678
BW31_02393
annotation not available (356 aa)
   
     
  0.678
BW31_04694
annotation not available (717 aa)
 
   
  0.625
BW31_01813
annotation not available (254 aa)
   
          0.585
BW31_04328
annotation not available (422 aa)
   
          0.580
BW31_00816
annotation not available (422 aa)
   
          0.580
BW31_01884
annotation not available (211 aa)
 
          0.566
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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