STRINGSTRING
BW31_03537 protein (Pantoea agglomerans) - STRING interaction network
"BW31_03537" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW31_03537annotation not available (415 aa)    
Predicted Functional Partners:
BW31_01253
annotation not available (98 aa)
   
        0.659
BW31_04978
annotation not available (59 aa)
   
          0.583
BW31_04798
annotation not available (420 aa)
   
          0.581
dusA
tRNA-dihydrouridine(20/20a) synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily (330 aa)
         
  0.573
BW31_04521
annotation not available (357 aa)
   
          0.508
amsK
annotation not available (407 aa)
   
          0.492
BW31_01596
annotation not available (164 aa)
   
        0.483
BW31_00583
annotation not available (203 aa)
   
          0.477
BW31_04797
annotation not available (738 aa)
   
          0.474
BW31_04970
annotation not available (225 aa)
   
          0.457
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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