STRINGSTRING
rhaT protein (Pantoea agglomerans) - STRING interaction network
"rhaT" - L-rhamnose-proton symporter in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaTL-rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) (344 aa)    
Predicted Functional Partners:
rhaB
Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate; Belongs to the rhamnulokinase family (490 aa)
 
   
  0.889
rhaR
annotation not available (287 aa)
 
   
  0.861
rhaA
annotation not available (418 aa)
 
   
  0.856
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde (280 aa)
 
   
  0.831
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose (104 aa)
 
   
  0.809
BW31_03908
annotation not available (289 aa)
 
   
  0.759
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (394 aa)
         
  0.584
mglA
Galactose/methyl galactoside import ATP-binding protein MglA; Part of the ABC transporter complex MglABC involved in galactose/methyl galactoside import. Responsible for energy coupling to the transport system (506 aa)
           
  0.572
glpT
annotation not available (446 aa)
           
  0.572
araC
annotation not available (305 aa)
   
   
  0.547
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
Server load: low (17%) [HD]