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ygfZ protein (Pantoea agglomerans) - STRING interaction network
"ygfZ" - tRNA-modifying protein YgfZ in Pantoea agglomerans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygfZtRNA-modifying protein YgfZ; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication (328 aa)    
Predicted Functional Partners:
holA
annotation not available (343 aa)
   
   
  0.669
chiP
annotation not available (465 aa)
           
  0.574
secE
Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation (127 aa)
   
     
  0.544
BW31_03787
annotation not available (244 aa)
   
          0.544
erpA
annotation not available (115 aa)
   
 
  0.537
BW31_04359
annotation not available (88 aa)
   
        0.534
BW31_02018
annotation not available (329 aa)
 
   
  0.523
hemD
annotation not available (242 aa)
   
          0.510
BW31_04360
annotation not available (136 aa)
              0.497
fumA_2
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (548 aa)
         
  0.493
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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