STRINGSTRING
BW31_04891 protein (Pantoea agglomerans) - STRING interaction network
"BW31_04891" - annotation not available in Pantoea agglomerans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW31_04891annotation not available (485 aa)    
Predicted Functional Partners:
BW31_04903
annotation not available (438 aa)
  0.936
BW31_02672
annotation not available (428 aa)
 
  0.928
sdhB
annotation not available (238 aa)
   
 
  0.910
sdhA
annotation not available (569 aa)
     
  0.909
sdhD
Succinate dehydrogenase hydrophobic membrane anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) (115 aa)
     
 
    0.905
BW31_00323
annotation not available (129 aa)
     
 
    0.904
gltA_1
annotation not available (427 aa)
 
 
  0.894
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (312 aa)
   
  0.853
BW31_02748
annotation not available (456 aa)
   
   
 
0.831
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily (465 aa)
     
  0.831
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea agglomerans, Pantoea herbicola, Pseudomonas herbicola
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