STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQP53714.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (484 aa)    
Predicted Functional Partners:
OQP68477.1
phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
OQP45777.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.476
OQP45704.1
Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
OQP50247.1
Peptidoglycan peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
OQP45779.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
OQP45702.1
Bleomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
OQP48903.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
OQP66199.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
OQP45780.1
RNA-dependent DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
OQP66200.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
  
     0.402
Your Current Organism:
Niastella populi
NCBI taxonomy Id: 550983
Other names: CCTCC AB 208238, KCTC 22560, N. populi, Niastella populi Zhang et al. 2010, Niastella sp. THYL-44, strain THYL-44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.