STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_10493Hmg box-containing protein c19g7.04. (701 aa)    
Predicted Functional Partners:
FSPOR_3480
Tata-box-binding.
    
 0.857
FSPOR_9633
Uncharacterized protein.
    
 0.753
FSPOR_10941
HIT domain-containing protein.
    
 0.726
FSPOR_10346
Biphenyl-2,3-diol 1,2-dioxygenase.
    
 0.726
FSPOR_10491
Hit family protein 1.
    
 0.726
FSPOR_6816
Uncharacterized protein.
    
 0.726
FSPOR_10625
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.715
FSPOR_7628
HIT domain-containing protein.
    
 0.706
FSPOR_3829
Uncharacterized protein.
     
 0.704
FSPOR_8702
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.695
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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