STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_9562Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (1954 aa)    
Predicted Functional Partners:
FSPOR_6559
Putative copii coated vesicle component sec24.
   
 0.997
FSPOR_3383
Transporter sec-13; Belongs to the WD repeat SEC13 family.
    
 0.993
FSPOR_7451
Uncharacterized protein.
   
 0.975
FSPOR_1065
Transporter sec23; Belongs to the universal ribosomal protein uL11 family.
   
 0.975
FSPOR_2481
Uncharacterized protein.
   
 0.959
FSPOR_2213
Uncharacterized protein.
   
 0.959
FSPOR_2139
Heterokaryon incompatibility het-c.
   
 0.959
FSPOR_10967
WD_REPEATS_REGION domain-containing protein.
   
 0.918
FSPOR_8174
Uncharacterized protein.
   
 0.918
FSPOR_8175
SRA1 domain-containing protein.
   
 0.918
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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