STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_8422Kh domain rna-binding. (372 aa)    
Predicted Functional Partners:
FSPOR_3770
Nuclear cap-binding protein subunit 2.
    
 0.800
FSPOR_9291
Uncharacterized protein.
    
 0.788
FSPOR_7991
RRM domain-containing protein.
   
 0.780
FSPOR_8863
Pre-mrna-splicing factor spp42.
    
   0.768
FSPOR_1483
Rna recognition.
    
 0.753
FSPOR_10029
Questionable protein.
   
 0.727
FSPOR_707
U1 small nuclear ribonucleo 70kda.
   
 0.694
FSPOR_5324
DNA-directed rna polymerase and iii subunit rpabc5.
   
  0.690
FSPOR_10979
RRM domain-containing protein.
   
 0.688
FSPOR_8986
Uncharacterized protein.
   
 0.688
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.