FSPOR_7745 protein (Fusarium sporotrichioides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FSPOR_7745

Er membrane. (432 aa)

Predicted Functional Partners:

FSPOR_9056

0.933

FSPOR_2382

0.828

FSPOR_7742

0.569

SEY1

0.473

FSPOR_618

0.428

FSPOR_7757

0.408

FSPOR_7695

0.404

Your Current Organism:

Fusarium sporotrichioides

NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSPOR_2382	FSPOR_618	A0A395SKT5	A0A395SSP2	Phosphatidate cytidylyltransferase.	Uncharacterized protein.	0.413
FSPOR_2382	FSPOR_7745	A0A395SKT5	A0A395RYD8	Phosphatidate cytidylyltransferase.	Er membrane.	0.828
FSPOR_2382	SEY1	A0A395SKT5	A0A395RNE7	Phosphatidate cytidylyltransferase.	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	0.485
FSPOR_618	FSPOR_2382	A0A395SSP2	A0A395SKT5	Uncharacterized protein.	Phosphatidate cytidylyltransferase.	0.413
FSPOR_618	FSPOR_7745	A0A395SSP2	A0A395RYD8	Uncharacterized protein.	Er membrane.	0.428
FSPOR_618	FSPOR_9056	A0A395SSP2	A0A395RS00	Uncharacterized protein.	Phosphatidate cytidylyltransferase.	0.552
FSPOR_618	SEY1	A0A395SSP2	A0A395RNE7	Uncharacterized protein.	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	0.745
FSPOR_7695	FSPOR_7745	A0A395RY90	A0A395RYD8	FCP1 homology domain-containing protein.	Er membrane.	0.404
FSPOR_7742	FSPOR_7745	A0A395RXC2	A0A395RYD8	Vesicle-associated membrane-associated b.	Er membrane.	0.569
FSPOR_7745	FSPOR_2382	A0A395RYD8	A0A395SKT5	Er membrane.	Phosphatidate cytidylyltransferase.	0.828
FSPOR_7745	FSPOR_618	A0A395RYD8	A0A395SSP2	Er membrane.	Uncharacterized protein.	0.428
FSPOR_7745	FSPOR_7695	A0A395RYD8	A0A395RY90	Er membrane.	FCP1 homology domain-containing protein.	0.404
FSPOR_7745	FSPOR_7742	A0A395RYD8	A0A395RXC2	Er membrane.	Vesicle-associated membrane-associated b.	0.569
FSPOR_7745	FSPOR_7757	A0A395RYD8	A0A395RXI1	Er membrane.	Copii-coated vesicle erv41.	0.408
FSPOR_7745	FSPOR_9056	A0A395RYD8	A0A395RS00	Er membrane.	Phosphatidate cytidylyltransferase.	0.933
FSPOR_7745	SEY1	A0A395RYD8	A0A395RNE7	Er membrane.	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	0.473
FSPOR_7757	FSPOR_7745	A0A395RXI1	A0A395RYD8	Copii-coated vesicle erv41.	Er membrane.	0.408
FSPOR_9056	FSPOR_618	A0A395RS00	A0A395SSP2	Phosphatidate cytidylyltransferase.	Uncharacterized protein.	0.552
FSPOR_9056	FSPOR_7745	A0A395RS00	A0A395RYD8	Phosphatidate cytidylyltransferase.	Er membrane.	0.933
FSPOR_9056	SEY1	A0A395RS00	A0A395RNE7	Phosphatidate cytidylyltransferase.	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	0.571