STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_6854Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
FSPOR_5348
WD_REPEATS_REGION domain-containing protein.
    
 0.681
FSPOR_857
Compass complex.
    
 0.675
FSPOR_18
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.654
FSPOR_1395
Uncharacterized protein.
    
 0.650
FSPOR_3383
Transporter sec-13; Belongs to the WD repeat SEC13 family.
    
 0.632
FSPOR_3826
Ulk ulk kinase.
    
 0.622
FSPOR_7435
Nuclear pore; Belongs to the WD repeat SEC13 family.
    
 0.603
FSPOR_329
Uba domain-containing 7.
    
  0.568
FSPOR_7884
Nedd8.
    
  0.567
FSPOR_11316
Uncharacterized protein.
    
  0.562
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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