FSPOR_2534 protein (Fusarium sporotrichioides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FSPOR_2534

Uncharacterized protein. (189 aa)

Predicted Functional Partners:

FSPOR_1581

0.691

FSPOR_3820

0.635

FSPOR_10972

0.630

FSPOR_10866

0.630

FSPOR_10399

0.630

FSPOR_2845

0.630

FSPOR_1881

0.630

FSPOR_1107

0.630

FSPOR_1294

0.630

FSPOR_86

0.630

Your Current Organism:

Fusarium sporotrichioides

NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSPOR_10399	FSPOR_1294	A0A395RLA2	A0A395SRY4	Alpha-glucosidase.	Glycoside hydrolase family 13.	0.889
FSPOR_10399	FSPOR_1881	A0A395RLA2	A0A395SP90	Alpha-glucosidase.	Aamy domain-containing protein.	0.651
FSPOR_10399	FSPOR_2534	A0A395RLA2	A0A395SL09	Alpha-glucosidase.	Uncharacterized protein.	0.630
FSPOR_10399	FSPOR_2845	A0A395RLA2	A0A395SIB2	Alpha-glucosidase.	Glucan 1,6-alpha-glucosidase.	0.888
FSPOR_10866	FSPOR_2534	A0A395RIU4	A0A395SL09	Trehalose-6-phosphate hydrolase.	Uncharacterized protein.	0.630
FSPOR_10972	FSPOR_2534	A0A395RIQ4	A0A395SL09	Uncharacterized protein.	Uncharacterized protein.	0.630
FSPOR_1107	FSPOR_2534	A0A395SPX7	A0A395SL09	Trehalose-6-phosphate hydrolase.	Uncharacterized protein.	0.630
FSPOR_1294	FSPOR_10399	A0A395SRY4	A0A395RLA2	Glycoside hydrolase family 13.	Alpha-glucosidase.	0.889
FSPOR_1294	FSPOR_1881	A0A395SRY4	A0A395SP90	Glycoside hydrolase family 13.	Aamy domain-containing protein.	0.645
FSPOR_1294	FSPOR_2534	A0A395SRY4	A0A395SL09	Glycoside hydrolase family 13.	Uncharacterized protein.	0.630
FSPOR_1294	FSPOR_2845	A0A395SRY4	A0A395SIB2	Glycoside hydrolase family 13.	Glucan 1,6-alpha-glucosidase.	0.889
FSPOR_1581	FSPOR_2534	A0A395SP15	A0A395SL09	3-dehydroquinate synthase.	Uncharacterized protein.	0.691
FSPOR_1581	FSPOR_3820	A0A395SP15	A0A395SEI0	3-dehydroquinate synthase.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.896
FSPOR_1881	FSPOR_10399	A0A395SP90	A0A395RLA2	Aamy domain-containing protein.	Alpha-glucosidase.	0.651
FSPOR_1881	FSPOR_1294	A0A395SP90	A0A395SRY4	Aamy domain-containing protein.	Glycoside hydrolase family 13.	0.645
FSPOR_1881	FSPOR_2534	A0A395SP90	A0A395SL09	Aamy domain-containing protein.	Uncharacterized protein.	0.630
FSPOR_1881	FSPOR_2845	A0A395SP90	A0A395SIB2	Aamy domain-containing protein.	Glucan 1,6-alpha-glucosidase.	0.650
FSPOR_2534	FSPOR_10399	A0A395SL09	A0A395RLA2	Uncharacterized protein.	Alpha-glucosidase.	0.630
FSPOR_2534	FSPOR_10866	A0A395SL09	A0A395RIU4	Uncharacterized protein.	Trehalose-6-phosphate hydrolase.	0.630
FSPOR_2534	FSPOR_10972	A0A395SL09	A0A395RIQ4	Uncharacterized protein.	Uncharacterized protein.	0.630