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Dehly_0318 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_0318" - TIGRFAM: ATP-dependent DNA helicase, RecQ family in Dehalogenimonas lykanthroporepellens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Dehly_0318TIGRFAM- ATP-dependent DNA helicase, RecQ family; PFAM- DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG- pph-Ppha_1436 DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicase ; helicase domain protein (690 aa)    
Predicted Functional Partners:
Dehly_0317
SMF family protein; KEGG- neu-NE2521 hypothetical protein; PFAM- SMF family protein; double-stranded RNA-specific adenosine deaminase (DRADA); SMART- double-stranded RNA-specific adenosine deaminase (DRADA) (421 aa)
   
  0.957
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (915 aa)
   
 
  0.882
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (342 aa)
     
 
  0.770
Dehly_0900
PFAM- UvrD/REP helicase; KEGG- dev-DhcVS_979 UvrD/REP helicase (747 aa)
 
 
  0.752
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (641 aa)
   
 
  0.748
Dehly_0037
KEGG- det-DET0024 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM- DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM- ComEC/Rec2-related protein (792 aa)
   
   
  0.742
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (824 aa)
   
 
  0.731
Dehly_0754
Single-stranded DNA-binding protein; KEGG- det-DET1045 single-strand binding protein; TIGRFAM- single-strand binding protein; PFAM- single-strand binding protein/Primosomal replication protein n (134 aa)
   
 
  0.685
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (466 aa)
   
   
  0.644
Dehly_1009
TIGRFAM- Mg chelatase, subunit ChlI; PFAM- magnesium chelatase ChlI subunit; KEGG- dev-DhcVS_858 magnesium chelatase; SMART- AAA ATPase (505 aa)
   
   
  0.636
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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