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Dehly_0345 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_0345" - UspA domain-containing protein in Dehalogenimonas lykanthroporepellens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_0345UspA domain-containing protein (285 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (209 aa)
              0.640
Dehly_0374
HEAT domain-containing protein (328 aa)
   
          0.608
Dehly_1509
UspA domain-containing protein (144 aa)
   
          0.561
Dehly_0767
Translin (215 aa)
   
          0.548
Dehly_0930
UspA domain-containing protein (121 aa)
   
          0.531
Dehly_0446
UspA domain-containing protein (161 aa)
   
          0.459
Dehly_0152
UspA domain-containing protein (153 aa)
   
          0.454
Dehly_1462
NurA domain-containing protein (400 aa)
   
          0.435
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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