STRINGSTRING
Dehly_0403 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_0403" - ABC transporter-like protein in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_0403ABC transporter-like protein (246 aa)    
Predicted Functional Partners:
Dehly_0402
Polar amino acid ABC transporter inner membrane subunit (275 aa)
  0.998
argH
Argininosuccinate lyase (457 aa)
         
  0.445
Dehly_0942
Hypothetical protein (424 aa)
     
    0.445
Dehly_0857
Hypothetical protein (304 aa)
   
        0.427
miaB
MiaB family RNA modification protein; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (417 aa)
              0.414
Dehly_0971
Binding-protein-dependent transporter inner membrane component (238 aa)
            0.414
Dehly_0970
Tungsten ABC transporter substrate-binding protein (308 aa)
              0.414
Dehly_0407
MiaB-like tRNA modifying enzyme (400 aa)
              0.414
Dehly_1594
ABC transporter-like protein (246 aa)
 
 
 
0.411
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
Server load: low (8%) [HD]