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Dehly_0407 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_0407" - TIGRFAM: MiaB-like tRNA modifying enzyme in Dehalogenimonas lykanthroporepellens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Dehly_0407TIGRFAM- MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM- Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG- det-DET0962 MiaB family tRNA modification protein; SMART- Elongator protein 3/MiaB/NifB (400 aa)    
Predicted Functional Partners:
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family (410 aa)
   
   
  0.691
Dehly_0790
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (760 aa)
         
  0.682
Dehly_0516
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (362 aa)
         
  0.642
Dehly_0408
PFAM- Protein of unknown function DUF128; Ribonuclease R winged-helix domain protein; KEGG- deb-DehaBAV1_0852 hypothetical protein (336 aa)
              0.586
Dehly_0406
KEGG- det-DET0754 hypothetical protein (101 aa)
              0.559
Dehly_0477
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (338 aa)
   
   
  0.526
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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