STRINGSTRING
Dehly_0749 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_0749" - Pyrrolo-quinoline quinone in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_0749Pyrrolo-quinoline quinone (362 aa)    
Predicted Functional Partners:
Dehly_0751
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (95 aa)
              0.863
Dehly_0750
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane (69 aa)
              0.863
rpmH
50S ribosomal protein L34 (46 aa)
              0.623
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (153 aa)
 
          0.583
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (439 aa)
   
 
  0.566
Dehly_0687
PHP domain-containing protein (220 aa)
   
          0.540
rlmN
Cfr family radical SAM protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (341 aa)
   
      0.492
Dehly_0021
Cfr family radical SAM protein (356 aa)
   
      0.492
Dehly_0754
ssDNA-binding protein (134 aa)
         
  0.476
hisS
histidyl-tRNA synthetase (418 aa)
   
        0.464
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
Server load: low (5%) [HD]