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Dehly_0850 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_0850" - Uroporphyrinogen decarboxylase in Dehalogenimonas lykanthroporepellens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_0850Uroporphyrinogen decarboxylase (325 aa)    
Predicted Functional Partners:
Dehly_1334
Radical SAM domain-containing protein (612 aa)
         
    0.900
Dehly_0901
Radical SAM domain-containing protein (460 aa)
         
    0.900
Dehly_0720
Radical SAM domain-containing protein (247 aa)
         
    0.900
Dehly_0678
Radical SAM domain-containing protein (616 aa)
         
    0.900
Dehly_0576
Oxygen-independent coproporphyrinogen III oxidase (380 aa)
         
    0.900
Dehly_0455
uroporphyrin-III C-methyltransferase (504 aa)
         
    0.900
Dehly_0450
Radical SAM domain-containing protein (381 aa)
         
    0.900
Dehly_0449
Radical SAM domain-containing protein (392 aa)
         
    0.900
Dehly_0398
Radical SAM domain-containing protein (425 aa)
         
    0.900
Dehly_0393
Radical SAM domain-containing protein (326 aa)
         
    0.900
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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