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Dehly_0871 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_0871" - Peptidase M50 in Dehalogenimonas lykanthroporepellens
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_0871Peptidase M50 (361 aa)    
Predicted Functional Partners:
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction (432 aa)
              0.783
Dehly_0869
Peptidase M50 (372 aa)
 
       
0.750
greA
GreA/GreB family elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (271 aa)
              0.638
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA (239 aa)
              0.588
Dehly_0874
Single-stranded nucleic acid-binding R3H domain-containing protein (512 aa)
 
        0.565
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (207 aa)
 
   
  0.524
Dehly_1416
Hypothetical protein (214 aa)
 
          0.502
Dehly_0568
Sigma 54 interacting domain-containing protein; May be involved in recombinational repair of damaged DNA (581 aa)
 
          0.483
Dehly_0893
Signal peptidase I (192 aa)
   
   
  0.452
rpmA
50S ribosomal protein L27 (84 aa)
   
        0.440
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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