STRINGSTRING
Dehly_1027 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1027" - Class I and II aminotransferase in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1027Class I and II aminotransferase (392 aa)    
Predicted Functional Partners:
Dehly_1028
AsnC family transcriptional regulator (161 aa)
 
     
  0.976
Dehly_0961
Homoserine dehydrogenase (432 aa)
 
 
  0.797
Dehly_0713
Class I and II aminotransferase (362 aa)
 
   
  0.654
Dehly_0331
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein (577 aa)
   
 
  0.628
Dehly_0218
Prephenate dehydratase (355 aa)
 
   
  0.597
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (588 aa)
   
 
  0.589
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (291 aa)
         
  0.582
pheA
Prephenate dehydratase (279 aa)
 
   
  0.574
Dehly_1029
Rubredoxin-type Fe(Cys)4 protein (167 aa)
   
        0.565
Dehly_1030
Glutaredoxin (92 aa)
   
        0.559
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
Server load: low (2%) [HD]