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Dehly_1102 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1102" - ECF subfamily RNA polymerase, sigma-24 subunit in Dehalogenimonas lykanthroporepellens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Dehly_1102ECF subfamily RNA polymerase, sigma-24 subunit (182 aa)    
Predicted Functional Partners:
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1296 aa)
   
 
 
  0.867
Dehly_1103
Hypothetical protein (276 aa)
              0.863
Dehly_1022
Serine protease, DegP (277 aa)
   
   
  0.478
Dehly_1021
Peptidase S1 and S6 chymotrypsin/Hap (285 aa)
   
   
  0.478
Dehly_0895
Peptidase S1 and S6 chymotrypsin/Hap (389 aa)
   
   
  0.478
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (264 aa)
 
          0.461
Dehly_0757
Signal transduction histidine kinase (1056 aa)
     
 
  0.431
Dehly_1113
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (512 aa)
         
  0.430
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (234 aa)
         
  0.416
cysS
cysteinyl-tRNA synthetase (482 aa)
              0.414
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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