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Dehly_1104 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1104" - GH3 auxin-responsive promoter in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1104GH3 auxin-responsive promoter (543 aa)    
Predicted Functional Partners:
Dehly_1105
Hypothetical protein (192 aa)
              0.884
Dehly_1111
Diguanylate cyclase and metal dependent phosphohydrolase (1108 aa)
 
          0.703
Dehly_0960
Putative protein export protein (426 aa)
   
          0.653
Dehly_1227
Putative type IV pilus assembly family protein (493 aa)
   
          0.647
Dehly_0720
Radical SAM domain-containing protein (247 aa)
   
          0.607
Dehly_0103
Hypothetical protein (196 aa)
   
          0.593
Dehly_0864
tubulin/FtsZ GTPase; Involved in cell shape control (392 aa)
   
          0.588
Dehly_0607
tubulin/FtsZ GTPase; Involved in cell shape control (389 aa)
   
          0.559
Dehly_1152
Reductive dehalogenase (458 aa)
   
          0.549
Dehly_1106
Hypothetical protein (138 aa)
              0.536
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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