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htpX protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"htpX" - Peptidase M48 Ste24p in Dehalogenimonas lykanthroporepellens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htpXPeptidase M48 Ste24p (402 aa)    
Predicted Functional Partners:
Dehly_1169
Hypothetical protein (406 aa)
              0.824
Dehly_1168
Hypothetical protein (169 aa)
              0.824
Dehly_1171
LemA family protein (188 aa)
 
     
  0.804
Dehly_1315
Threonine aldolase (340 aa)
       
      0.577
Dehly_1172
Hypothetical protein (139 aa)
              0.558
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body (174 aa)
       
 
  0.508
Dehly_1167
DEAD/DEAH box helicase (429 aa)
   
        0.500
dnaK
Chaperone protein DnaK; Acts as a chaperone (642 aa)
   
 
  0.484
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (649 aa)
   
 
  0.477
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (174 aa)
         
  0.460
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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