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Dehly_1244 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1244" - Hypothetical protein in Dehalogenimonas lykanthroporepellens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1244Hypothetical protein (164 aa)    
Predicted Functional Partners:
Dehly_1243
Cobalamin (vitamin B12) biosynthesis protein CbiM (214 aa)
 
          0.973
Dehly_1242
Cobalt ABC transporter inner membrane subunit CbiQ (265 aa)
 
          0.973
Dehly_1241
ABC transporter-like protein (263 aa)
 
          0.966
Dehly_1245
Hypothetical protein (255 aa)
              0.884
Dehly_1459
Hypothetical protein (522 aa)
   
          0.715
Dehly_1462
NurA domain-containing protein (400 aa)
   
          0.700
Dehly_1247
Hypothetical protein (146 aa)
              0.605
Dehly_1246
DNA polymerase beta domain-containing protein (204 aa)
              0.605
Dehly_1460
Hypothetical protein (198 aa)
   
          0.568
sbcD
Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (412 aa)
   
          0.565
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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